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  5. Solyc06g082740.3.1

Solyc06g082740.3.1


Description : ER-associated protein (Reticulon)


Gene families : OG0000225 (Archaeplastida) Phylogenetic Tree(s): OG0000225_tree ,
OG_05_0000137 (LandPlants) Phylogenetic Tree(s): OG_05_0000137_tree ,
OG_06_0013103 (SeedPlants) Phylogenetic Tree(s): OG_06_0013103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g082740.3.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT4G01230 No alias Reticulon family protein 0.04 Archaeplastida
LOC_Os05g24770.1 No alias ER-associated protein (Reticulon) 0.04 Archaeplastida
LOC_Os05g47690.1 No alias ER-associated protein (Reticulon) 0.02 Archaeplastida
LOC_Os06g30750.1 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida
MA_654072g0010 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida
Zm00001e027185_P001 No alias ER-associated protein (Reticulon) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR003388 Reticulon 63 211
No external refs found!