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  5. Solyc06g082910.3.1

Solyc06g082910.3.1


Description : group-I formin actin filament elongation factor


Gene families : OG0000460 (Archaeplastida) Phylogenetic Tree(s): OG0000460_tree ,
OG_05_0000315 (LandPlants) Phylogenetic Tree(s): OG_05_0000315_tree ,
OG_06_0000245 (SeedPlants) Phylogenetic Tree(s): OG_06_0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g082910.3.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00173780 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
Gb_33203 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida
LOC_Os03g10680.1 No alias Formin-like protein 8 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Pp3c18_4770V3.1 No alias Actin-binding FH2 (formin homology 2) family protein 0.02 Archaeplastida
Solyc05g006430.3.1 No alias group-I formin actin filament elongation factor 0.02 Archaeplastida
Zm00001e000748_P001 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida
Zm00001e007899_P001 No alias group-I formin actin filament elongation factor 0.08 Archaeplastida
Zm00001e010169_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e012597_P001 No alias group-I formin actin filament elongation factor 0.02 Archaeplastida
Zm00001e018960_P001 No alias group-I formin actin filament elongation factor 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR015425 FH2_Formin 486 883
No external refs found!