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  5. Solyc06g083110.2.1

Solyc06g083110.2.1


Description : YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana (sp|q9sue0|ymg12_arath : 176.0)


Gene families : OG0001615 (Archaeplastida) Phylogenetic Tree(s): OG0001615_tree ,
OG_05_0004624 (LandPlants) Phylogenetic Tree(s): OG_05_0004624_tree ,
OG_06_0004946 (SeedPlants) Phylogenetic Tree(s): OG_06_0004946_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g083110.2.1
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00238310 evm_27.TU.AmTr_v1... YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G07430 emb1990,... YGGT family protein 0.05 Archaeplastida
Cre02.g080250 No alias No description available 0.03 Archaeplastida
Cre12.g557050 No alias YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01031640001 No alias YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01035473001 No alias YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os07g08770.1 No alias YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis... 0.04 Archaeplastida
MA_961483g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp8g11810.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c10_6170V3.1 No alias YGGT family protein 0.02 Archaeplastida
Zm00001e000570_P001 No alias YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e032968_P001 No alias YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis... 0.07 Archaeplastida
Zm00001e038876_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004019 adenylosuccinate synthase activity IEP Neighborhood
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Neighborhood
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Neighborhood
BP GO:0006450 regulation of translational fidelity IEP Neighborhood
BP GO:0006547 histidine metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
MF GO:0019238 cyclohydrolase activity IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0052803 imidazole-containing compound metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003425 CCB3/YggT 146 214
No external refs found!