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  5. Solyc06g083530.3.1

Solyc06g083530.3.1


Description : R-SNARE component VAMP721/VAMP722 of SNARE cell-plate vesicle fusion complex. VAMP7-type R-type SNARE longin protein


Gene families : OG0000293 (Archaeplastida) Phylogenetic Tree(s): OG0000293_tree ,
OG_05_0000618 (LandPlants) Phylogenetic Tree(s): OG_05_0000618_tree ,
OG_06_0000855 (SeedPlants) Phylogenetic Tree(s): OG_06_0000855_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g083530.3.1
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00148060 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
AT3G54300 VAMP727, ATVAMP727 vesicle-associated membrane protein 727 0.02 Archaeplastida
Cpa|evm.model.tig00000880.51 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
Cre04.g224750 No alias Vesicle trafficking.SNARE target membrane recognition... 0.05 Archaeplastida
Cre04.g225850 No alias Vesicle trafficking.SNARE target membrane recognition... 0.06 Archaeplastida
Cre04.g225900 No alias Vesicle trafficking.SNARE target membrane recognition... 0.05 Archaeplastida
GSVIVT01028579001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 Archaeplastida
Gb_23049 No alias VAMP7-type R-type SNARE longin protein 0.03 Archaeplastida
Gb_34159 No alias VAMP7-type R-type SNARE longin protein 0.05 Archaeplastida
LOC_Os03g06960.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 Archaeplastida
LOC_Os07g09600.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.07 Archaeplastida
LOC_Os07g14540.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.04 Archaeplastida
MA_11045g0010 No alias VAMP7-type R-type SNARE longin protein 0.03 Archaeplastida
MA_92947g0030 No alias VAMP7-type R-type SNARE longin protein 0.06 Archaeplastida
Mp7g07410.1 No alias VAMP7-type R-type SNARE longin protein 0.03 Archaeplastida
Pp3c12_11090V3.1 No alias vesicle-associated membrane protein 726 0.02 Archaeplastida
Pp3c4_13580V3.1 No alias vesicle-associated membrane protein 726 0.04 Archaeplastida
Solyc02g069150.3.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida
Zm00001e000500_P003 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida
Zm00001e003924_P002 No alias VAMP7-type R-type SNARE longin protein 0.04 Archaeplastida
Zm00001e009585_P002 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.07 Archaeplastida
Zm00001e011409_P003 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.06 Archaeplastida
Zm00001e033056_P001 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida
Zm00001e039018_P001 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006096 glycolytic process IEP Neighborhood
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Neighborhood
BP GO:0006757 ATP generation from ADP IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0009132 nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009166 nucleotide catabolic process IEP Neighborhood
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Neighborhood
BP GO:0019362 pyridine nucleotide metabolic process IEP Neighborhood
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0042866 pyruvate biosynthetic process IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0046031 ADP metabolic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0046939 nucleotide phosphorylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0072524 pyridine-containing compound metabolic process IEP Neighborhood
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR010908 Longin_dom 32 111
IPR001388 Synaptobrevin 129 215
No external refs found!