Solyc06g083820.3.1

Description : component RPL14 of LSU proteome component

Gene families : OG0002563 (Archaeplastida) Phylogenetic Tree(s): OG0002563_tree ,
OG_05_0002861 (LandPlants) Phylogenetic Tree(s): OG_05_0002861_tree ,
OG_06_0003445 (SeedPlants) Phylogenetic Tree(s): OG_06_0003445_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g083820.3.1
Cluster	HCCA: Cluster_142

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00164470	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.1	Archaeplastida
AMTR_s00067p00096180	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.18	Archaeplastida
AT2G20450	No alias	Ribosomal protein L14	0.08	Archaeplastida
AT4G27090	No alias	Ribosomal protein L14	0.14	Archaeplastida
Cpa\|evm.model.tig00000194.50	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.18	Archaeplastida
Cre17.g701200	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.13	Archaeplastida
GSVIVT01012876001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.13	Archaeplastida
GSVIVT01027844001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.16	Archaeplastida
Gb_21078	No alias	component RPL14 of LSU proteome component	0.09	Archaeplastida
LOC_Os02g40880.1	No alias	component RPL14 of LSU proteome component	0.15	Archaeplastida
MA_10433933g0010	No alias	component RPL14 of LSU proteome component	0.04	Archaeplastida
MA_10434733g0010	No alias	component RPL14 of LSU proteome component	0.1	Archaeplastida
MA_99106g0010	No alias	component RPL14 of LSU proteome component	0.17	Archaeplastida
Mp8g17070.1	No alias	component RPL14 of LSU proteome component	0.18	Archaeplastida
Pp3c15_5860V3.1	No alias	Ribosomal protein L14	0.19	Archaeplastida
Pp3c20_860V3.1	No alias	Ribosomal protein L14	0.08	Archaeplastida
Pp3c23_22060V3.1	No alias	Ribosomal protein L14	0.08	Archaeplastida
Pp3c24_20890V3.1	No alias	Ribosomal protein L14	0.15	Archaeplastida
Pp3c8_25050V3.1	No alias	Ribosomal protein L14	0.05	Archaeplastida
Smo403602	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.09	Archaeplastida
Zm00001e010296_P001	No alias	component RPL14 of LSU proteome component	0.15	Archaeplastida
Zm00001e034932_P003	No alias	component RPL14 of LSU proteome component	0.15	Archaeplastida
Zm00001e041233_P002	No alias	component RPL14 of LSU proteome component	0.14	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
BP	GO:0006334	nucleosome assembly	IEP	Neighborhood
BP	GO:0006364	rRNA processing	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
BP	GO:0006553	lysine metabolic process	IEP	Neighborhood
MF	GO:0008097	5S rRNA binding	IEP	Neighborhood
MF	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase	IEP	Neighborhood
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009085	lysine biosynthetic process	IEP	Neighborhood
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	Neighborhood
CC	GO:0015934	large ribosomal subunit	IEP	Neighborhood
BP	GO:0016072	rRNA metabolic process	IEP	Neighborhood
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
BP	GO:0034728	nucleosome organization	IEP	Neighborhood
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Neighborhood
CC	GO:0044391	ribosomal subunit	IEP	Neighborhood
BP	GO:0046451	diaminopimelate metabolic process	IEP	Neighborhood
BP	GO:0065004	protein-DNA complex assembly	IEP	Neighborhood
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002784	Ribosomal_L14e_dom	45	117

External Links

No external refs found!

Solyc06g083820.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation