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  5. AMTR_s00027p00217960

AMTR_s00027p00217960 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00027.81

Description : Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0003286 (Archaeplastida) Phylogenetic Tree(s): OG0003286_tree ,
OG_05_0007657 (LandPlants) Phylogenetic Tree(s): OG_05_0007657_tree ,
OG_06_0009327 (SeedPlants) Phylogenetic Tree(s): OG_06_0009327_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00027p00217960
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT4G27700 No alias Rhodanese/Cell cycle control phosphatase superfamily protein 0.11 Archaeplastida
Cre01.g003550 No alias Rhodanese-like domain-containing protein 14,... 0.01 Archaeplastida
Cre02.g111450 No alias No description available 0.1 Archaeplastida
Cre16.g650050 No alias Rhodanese-like domain-containing protein 14,... 0.05 Archaeplastida
GSVIVT01038606001 No alias Rhodanese-like domain-containing protein 14,... 0.08 Archaeplastida
Gb_06964 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_06965 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g36040.1 No alias Rhodanese-like domain-containing protein 14,... 0.05 Archaeplastida
MA_85383g0010 No alias Rhodanese-like domain-containing protein 14,... 0.08 Archaeplastida
Mp3g12160.1 No alias Rhodanese-like domain-containing protein 14,... 0.03 Archaeplastida
Mp6g02370.1 No alias Rhodanese-like domain-containing protein 14,... 0.05 Archaeplastida
Pp3c15_4960V3.1 No alias Rhodanese/Cell cycle control phosphatase superfamily protein 0.13 Archaeplastida
Pp3c5_3150V3.1 No alias Rhodanese/Cell cycle control phosphatase superfamily protein 0.03 Archaeplastida
Smo174737 No alias Rhodanese-like domain-containing protein 14,... 0.07 Archaeplastida
Smo417803 No alias No description available 0.04 Archaeplastida
Solyc06g053140.3.1 No alias Rhodanese-like domain-containing protein 14,... 0.11 Archaeplastida
Zm00001e034766_P002 No alias No annotation 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005960 glycine cleavage complex IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006553 lysine metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0009085 lysine biosynthetic process IEP Neighborhood
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Neighborhood
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0046422 violaxanthin de-epoxidase activity IEP Neighborhood
BP GO:0046451 diaminopimelate metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001763 Rhodanese-like_dom 87 220
No external refs found!