1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g084530.3.1

Solyc06g084530.3.1


Description : ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana (sp|f4jex5|figl1_arath : 223.0)


Gene families : OG0000285 (Archaeplastida) Phylogenetic Tree(s): OG0000285_tree ,
OG_05_0001759 (LandPlants) Phylogenetic Tree(s): OG_05_0001759_tree ,
OG_06_0001702 (SeedPlants) Phylogenetic Tree(s): OG_06_0001702_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g084530.3.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00232570 evm_27.TU.AmTr_v1... ATPase family AAA domain-containing protein FIGL1... 0.03 Archaeplastida
AT3G19740 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Archaeplastida
Gb_15618 No alias ATPase family AAA domain-containing protein FIGL1... 0.02 Archaeplastida
Pp3c21_4860V3.1 No alias AAA-type ATPase family protein 0.02 Archaeplastida
Pp3c5_8900V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
Zm00001e011359_P005 No alias ATPase family AAA domain-containing protein FIGL1... 0.03 Archaeplastida
Zm00001e016412_P002 No alias ATPase family AAA domain-containing protein FIGL1... 0.03 Archaeplastida
Zm00001e021043_P002 No alias ATPase family AAA domain-containing protein FIGL1... 0.03 Archaeplastida
Zm00001e038215_P002 No alias ATPase family AAA domain-containing protein FIGL1... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
InterPro domains Description Start Stop
IPR000253 FHA_dom 152 223
IPR003959 ATPase_AAA_core 987 1116
No external refs found!