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  5. Solyc07g005170.3.1

Solyc07g005170.3.1


Description : Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidopsis thaliana (sp|q56xi1|ppr25_arath : 463.0)


Gene families : OG0016348 (Archaeplastida) Phylogenetic Tree(s): OG0016348_tree ,
OG_05_0029170 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0027632 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g005170.3.1


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 339 386
IPR002885 Pentatricopeptide_repeat 437 485
IPR002885 Pentatricopeptide_repeat 215 248
IPR002885 Pentatricopeptide_repeat 128 155
IPR002885 Pentatricopeptide_repeat 157 186
IPR002885 Pentatricopeptide_repeat 512 536
IPR002885 Pentatricopeptide_repeat 280 308
IPR002885 Pentatricopeptide_repeat 97 123
IPR002885 Pentatricopeptide_repeat 249 278
IPR002885 Pentatricopeptide_repeat 64 92
No external refs found!