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  5. Solyc07g006000.3.1

Solyc07g006000.3.1


Description : component psRPL35 of large ribosomal subunit proteome


Gene families : OG0006995 (Archaeplastida) Phylogenetic Tree(s): OG0006995_tree ,
OG_05_0007071 (LandPlants) Phylogenetic Tree(s): OG_05_0007071_tree ,
OG_06_0008475 (SeedPlants) Phylogenetic Tree(s): OG_06_0008475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g006000.3.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00070230 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.06 Archaeplastida
AT2G24090 No alias Ribosomal protein L35 0.2 Archaeplastida
Cre04.g217932 No alias Protein biosynthesis.organelle translation... 0.13 Archaeplastida
GSVIVT01012561001 No alias Protein biosynthesis.organelle translation... 0.01 Archaeplastida
GSVIVT01012574001 No alias Protein biosynthesis.organelle translation... 0.05 Archaeplastida
Gb_16123 No alias component psRPL35 of large ribosomal subunit proteome 0.1 Archaeplastida
LOC_Os06g43900.1 No alias component psRPL35 of large ribosomal subunit proteome 0.14 Archaeplastida
MA_181338g0010 No alias component psRPL35 of large ribosomal subunit proteome 0.07 Archaeplastida
Mp5g05850.1 No alias component psRPL35 of large ribosomal subunit proteome 0.22 Archaeplastida
Pp3c21_8680V3.1 No alias Ribosomal protein L35 0.05 Archaeplastida
Pp3c22_13420V3.1 No alias Ribosomal protein L35 0.13 Archaeplastida
Smo444022 No alias Protein biosynthesis.organelle translation... 0.05 Archaeplastida
Zm00001e037448_P001 No alias component psRPL35 of large ribosomal subunit proteome 0.19 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004807 triose-phosphate isomerase activity IEP Neighborhood
MF GO:0004832 valine-tRNA ligase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006438 valyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
CC GO:0009512 cytochrome b6f complex IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR021137 Ribosomal_L35 86 142
No external refs found!