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  5. Solyc07g006630.4.1

Solyc07g006630.4.1


Description : no hits & (original description: none)


Gene families : OG0000859 (Archaeplastida) Phylogenetic Tree(s): OG0000859_tree ,
OG_05_0001138 (LandPlants) Phylogenetic Tree(s): OG_05_0001138_tree ,
OG_06_0001151 (SeedPlants) Phylogenetic Tree(s): OG_06_0001151_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g006630.4.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00262710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
AT2G24790 COL3, ATCOL3 CONSTANS-like 3 0.06 Archaeplastida
AT3G02380 COL2, ATCOL2 CONSTANS-like 2 0.06 Archaeplastida
AT5G15850 COL1, ATCOL1 CONSTANS-like 1 0.06 Archaeplastida
AT5G24930 ATCOL4, COL4 CONSTANS-like 4 0.07 Archaeplastida
AT5G57660 ATCOL5, COL5 CONSTANS-like 5 0.04 Archaeplastida
Cre06.g278159 No alias Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre12.g534100 No alias No description available 0.05 Archaeplastida
GSVIVT01029107001 No alias Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01036037001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01036499001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
Gb_27657 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
LOC_Os02g39710.1 No alias transcription factor (BBX-CO) 0.06 Archaeplastida
LOC_Os06g44450.1 No alias Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os09g06464.1 No alias Zinc finger protein CO3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os10g41100.1 No alias Transcription factor GHD7 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Mp8g13470.1 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
Pp3c2_31580V3.1 No alias CONSTANS-like 4 0.03 Archaeplastida
Pp3c7_25600V3.1 No alias CONSTANS-like 4 0.06 Archaeplastida
Zm00001e002319_P001 No alias Transcription factor GHD7 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e007691_P001 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
Zm00001e037706_P002 No alias Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e037873_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!