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  4. Sequence
  5. Solyc07g006900.2.1

Solyc07g006900.2.1


Description : auxin transporter (PIN). auxin efflux transporter (PIN)


Gene families : OG0000353 (Archaeplastida) Phylogenetic Tree(s): OG0000353_tree ,
OG_05_0000237 (LandPlants) Phylogenetic Tree(s): OG_05_0000237_tree ,
OG_06_0000465 (SeedPlants) Phylogenetic Tree(s): OG_06_0000465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g006900.2.1
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00137670 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
AMTR_s00013p00241000 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
AMTR_s00019p00250330 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
AMTR_s00101p00149240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
AT1G23080 PIN7, ATPIN7 Auxin efflux carrier family protein 0.05 Archaeplastida
AT1G70940 PIN3, ATPIN3 Auxin efflux carrier family protein 0.04 Archaeplastida
AT1G73590 ATPIN1, PIN1 Auxin efflux carrier family protein 0.05 Archaeplastida
AT1G77110 PIN6 Auxin efflux carrier family protein 0.07 Archaeplastida
AT2G01420 ATPIN4, PIN4 Auxin efflux carrier family protein 0.05 Archaeplastida
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.12 Archaeplastida
GSVIVT01008430001 No alias Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
GSVIVT01011756001 No alias Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
GSVIVT01019110001 No alias Solute transport.carrier-mediated transport.BART... 0.07 Archaeplastida
GSVIVT01025748001 No alias Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
GSVIVT01029266001 No alias Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
GSVIVT01031663001 No alias Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
LOC_Os01g45550.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.08 Archaeplastida
LOC_Os01g51780.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
LOC_Os01g58860.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
LOC_Os02g50960.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
LOC_Os06g12610.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 Archaeplastida
LOC_Os06g44970.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 Archaeplastida
MA_10433084g0010 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Mp6g07950.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Pp3c10_24880V3.1 No alias Auxin efflux carrier family protein 0.02 Archaeplastida
Pp3c23_10200V3.1 No alias Auxin efflux carrier family protein 0.05 Archaeplastida
Pp3c24_2970V3.1 No alias Auxin efflux carrier family protein 0.02 Archaeplastida
Smo99301 No alias Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
Solyc02g087660.4.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Solyc06g059730.3.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Solyc10g078370.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Zm00001e019540_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Zm00001e036089_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Zm00001e037682_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.08 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0004312 fatty acid synthase activity IEP Neighborhood
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 626
No external refs found!