- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : defensin (PDF2)
Gene families : OG0001480 (Archaeplastida) Phylogenetic Tree(s): OG0001480_tree ,
OG_05_0000951 (LandPlants) Phylogenetic Tree(s): OG_05_0000951_tree ,
OG_06_0000613 (SeedPlants) Phylogenetic Tree(s): OG_06_0000613_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc07g007735.1.1 | |
| Cluster | HCCA: Cluster_184 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G61070 | PDF2.4, LCR66 | low-molecular-weight cysteine-rich 66 | 0.04 | Archaeplastida | |
| LOC_Os04g44130.1 | No alias | defensin (PDF2) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004129 | cytochrome-c oxidase activity | IEP | Neighborhood |
| MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | Neighborhood |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
| MF | GO:0015002 | heme-copper terminal oxidase activity | IEP | Neighborhood |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | Neighborhood |
| BP | GO:0015743 | malate transport | IEP | Neighborhood |
| MF | GO:0016675 | oxidoreductase activity, acting on a heme group of donors | IEP | Neighborhood |
| MF | GO:0016676 | oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor | IEP | Neighborhood |
| MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Neighborhood |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Neighborhood |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Neighborhood |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Neighborhood |
| BP | GO:0042255 | ribosome assembly | IEP | Neighborhood |
| BP | GO:0042256 | mature ribosome assembly | IEP | Neighborhood |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Neighborhood |
| MF | GO:0043022 | ribosome binding | IEP | Neighborhood |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Neighborhood |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Neighborhood |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| BP | GO:0070925 | organelle assembly | IEP | Neighborhood |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |