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  5. Solyc07g007940.3.1

Solyc07g007940.3.1


Description : component SNAPC1 of SNAP snRNA transcription factor complex


Gene families : OG0005887 (Archaeplastida) Phylogenetic Tree(s): OG0005887_tree ,
OG_05_0005759 (LandPlants) Phylogenetic Tree(s): OG_05_0005759_tree ,
OG_06_0006721 (SeedPlants) Phylogenetic Tree(s): OG_06_0006721_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g007940.3.1
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
Cre06.g279183 No alias No description available 0.01 Archaeplastida
Smo405061 No alias No description available 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002098 tRNA wobble uridine modification IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR019188 SNAPc_SNAP43 6 201
No external refs found!