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  5. Solyc07g008250.3.1

Solyc07g008250.3.1


Description : EBF-type ethylene signal transducer. component EBF of SCF E3 ubiquitin ligase complex


Gene families : OG0002999 (Archaeplastida) Phylogenetic Tree(s): OG0002999_tree ,
OG_05_0002473 (LandPlants) Phylogenetic Tree(s): OG_05_0002473_tree ,
OG_06_0002450 (SeedPlants) Phylogenetic Tree(s): OG_06_0002450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g008250.3.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01035856001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os02g10700.1 No alias EBF-type ethylene signal transducer. component EBF of... 0.06 Archaeplastida
LOC_Os06g40360.1 No alias EBF-type ethylene signal transducer. component EBF of... 0.06 Archaeplastida
Solyc05g008700.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g008730.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g049010.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e037419_P001 No alias EBF-type ethylene signal transducer. component EBF of... 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 59 99
IPR001611 Leu-rich_rpt 476 498
IPR001611 Leu-rich_rpt 213 236
IPR001611 Leu-rich_rpt 557 578
IPR001611 Leu-rich_rpt 238 261
No external refs found!