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  5. Solyc07g014590.4.1

Solyc07g014590.4.1


Description : starch debranching enzyme. starch-debranching isoamylase-type enzyme


Gene families : OG0001068 (Archaeplastida) Phylogenetic Tree(s): OG0001068_tree ,
OG_05_0002327 (LandPlants) Phylogenetic Tree(s): OG_05_0002327_tree ,
OG_06_0002831 (SeedPlants) Phylogenetic Tree(s): OG_06_0002831_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g014590.4.1
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00166810 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.04 Archaeplastida
AMTR_s00025p00193210 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.04 Archaeplastida
AMTR_s00156p00067780 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.06 Archaeplastida
AT1G03310 DBE1, ATISA2, BE2, ISA2 debranching enzyme 1 0.08 Archaeplastida
AT2G39930 ATISA1, ISA1 isoamylase 1 0.06 Archaeplastida
AT4G09020 ATISA3, ISA3 isoamylase 3 0.06 Archaeplastida
Cre03.g155001 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Cre03.g207713 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Gb_23290 No alias starch debranching enzyme. starch-debranching... 0.04 Archaeplastida
LOC_Os08g40930.1 No alias starch debranching enzyme. starch-debranching... 0.03 Archaeplastida
MA_10431226g0020 No alias starch debranching enzyme. starch-debranching... 0.04 Archaeplastida
Mp3g09040.1 No alias starch debranching enzyme. starch-debranching... 0.03 Archaeplastida
Pp3c8_12820V3.1 No alias debranching enzyme 1 0.02 Archaeplastida
Solyc09g064800.3.1 No alias starch debranching enzyme. starch-debranching... 0.04 Archaeplastida
Zm00001e021910_P001 No alias starch debranching enzyme. starch-debranching... 0.04 Archaeplastida
Zm00001e034431_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004645 phosphorylase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008184 glycogen phosphorylase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 79 173
IPR006047 Glyco_hydro_13_cat_dom 243 349
No external refs found!