Description : Polygalacturonase At1g48100 OS=Arabidopsis thaliana (sp|q949z1|pglr4_arath : 325.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 196.9)
Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0000636 (LandPlants) Phylogenetic Tree(s): OG_05_0000636_tree ,
OG_06_0001748 (SeedPlants) Phylogenetic Tree(s): OG_06_0001748_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc07g015870.4.1 | |
Cluster | HCCA: Cluster_66 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00197480 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and... | 0.07 | Archaeplastida | |
AMTR_s00103p00121270 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and... | 0.03 | Archaeplastida | |
AT1G05660 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
AT1G65570 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT1G80170 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
AT2G43890 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
AT4G01890 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
AT5G14650 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
GSVIVT01008061001 | No alias | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01017305001 | No alias | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01017644001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
GSVIVT01032447001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01033359001 | No alias | Cell wall.pectin.modification and... | 0.06 | Archaeplastida | |
GSVIVT01033364001 | No alias | Cell wall.pectin.modification and... | 0.03 | Archaeplastida | |
Gb_12018 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.03 | Archaeplastida | |
Gb_13356 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.08 | Archaeplastida | |
LOC_Os01g19170.1 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
LOC_Os01g43490.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.03 | Archaeplastida | |
LOC_Os03g59330.1 | No alias | polygalacturonase (QRT2) | 0.11 | Archaeplastida | |
LOC_Os05g50260.1 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.06 | Archaeplastida | |
LOC_Os07g10730.1 | No alias | Polygalacturonase OS=Actinidia deliciosa... | 0.07 | Archaeplastida | |
MA_101764g0010 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
MA_10431579g0010 | No alias | Polygalacturonase OS=Cryptomeria japonica... | 0.04 | Archaeplastida | |
MA_13282g0010 | No alias | Polygalacturonase OS=Actinidia deliciosa... | 0.03 | Archaeplastida | |
MA_640601g0010 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
MA_9231294g0010 | No alias | No annotation | 0.02 | Archaeplastida | |
Smo78038 | No alias | Cell wall.pectin.modification and... | 0.03 | Archaeplastida | |
Solyc01g087280.2.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Solyc02g067630.3.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.04 | Archaeplastida | |
Solyc04g015530.3.1 | No alias | polygalacturonase (QRT2) | 0.04 | Archaeplastida | |
Solyc04g025440.3.1 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.02 | Archaeplastida | |
Solyc12g009420.3.1 | No alias | Polygalacturonase QRT2 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
Solyc12g019180.2.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.04 | Archaeplastida | |
Solyc12g019220.1.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.04 | Archaeplastida | |
Zm00001e026240_P001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
Zm00001e027720_P001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | Interproscan |
BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004334 | fumarylacetoacetase activity | IEP | Neighborhood |
MF | GO:0004568 | chitinase activity | IEP | Neighborhood |
MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
BP | GO:0006022 | aminoglycan metabolic process | IEP | Neighborhood |
BP | GO:0006026 | aminoglycan catabolic process | IEP | Neighborhood |
BP | GO:0006030 | chitin metabolic process | IEP | Neighborhood |
BP | GO:0006032 | chitin catabolic process | IEP | Neighborhood |
BP | GO:0006040 | amino sugar metabolic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Neighborhood |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
MF | GO:0016822 | hydrolase activity, acting on acid carbon-carbon bonds | IEP | Neighborhood |
MF | GO:0016823 | hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances | IEP | Neighborhood |
BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Neighborhood |
MF | GO:0020037 | heme binding | IEP | Neighborhood |
BP | GO:0042737 | drug catabolic process | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0046348 | amino sugar catabolic process | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Neighborhood |
BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Neighborhood |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Neighborhood |
No external refs found! |