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  5. Solyc07g015905.1.1

Solyc07g015905.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 164.0)


Gene families : OG0000100 (Archaeplastida) Phylogenetic Tree(s): OG0000100_tree ,
OG_05_0000036 (LandPlants) Phylogenetic Tree(s): OG_05_0000036_tree ,
OG_06_0000011 (SeedPlants) Phylogenetic Tree(s): OG_06_0000011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g015905.1.1
Cluster HCCA: Cluster_586

Target Alias Description ECC score Gene Family Method Actions
Solyc01g057523.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.03 Archaeplastida
Solyc01g058685.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc01g066345.1.1 No alias No annotation 0.09 Archaeplastida
Solyc02g062915.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.17 Archaeplastida
Solyc04g050955.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc04g150118.1.1 No alias No annotation 0.14 Archaeplastida
Solyc05g150143.1.1 No alias No annotation 0.2 Archaeplastida
Solyc06g011407.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.14 Archaeplastida
Solyc07g017605.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc07g026893.1.1 No alias No annotation 0.04 Archaeplastida
Solyc07g039455.1.1 No alias No annotation 0.07 Archaeplastida
Solyc07g040905.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.01 Archaeplastida
Solyc07g056702.1.1 No alias No annotation 0.06 Archaeplastida
Solyc07g061865.1.1 No alias No annotation 0.01 Archaeplastida
Solyc08g043143.1.1 No alias No annotation 0.05 Archaeplastida
Solyc08g066495.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g059105.1.1 No alias No annotation 0.07 Archaeplastida
Solyc09g059157.1.1 No alias No annotation 0.09 Archaeplastida
Solyc10g019145.1.1 No alias No annotation 0.17 Archaeplastida
Solyc10g038187.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.08 Archaeplastida
Solyc10g048015.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.03 Archaeplastida
Solyc10g074828.1.1 No alias no hits & (original description: none) 0.17 Archaeplastida
Solyc11g020847.1.1 No alias No annotation 0.01 Archaeplastida
Solyc12g036475.1.1 No alias No annotation 0.02 Archaeplastida
Solyc12g040817.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.01 Archaeplastida
Solyc12g077525.1.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013103 RVT_2 1 55
No external refs found!