Description : pectin methylesterase
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc07g017560.4.1 | |
Cluster | HCCA: Cluster_132 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00238240 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00003p00239700 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.09 | Archaeplastida | |
AMTR_s00033p00227850 | evm_27.TU.AmTr_v1... | Probable pectinesterase/pectinesterase inhibitor 21... | 0.1 | Archaeplastida | |
AMTR_s00040p00188020 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.13 | Archaeplastida | |
AMTR_s00129p00028250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.18 | Archaeplastida | |
AMTR_s00129p00044320 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AT2G26450 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.15 | Archaeplastida | |
AT3G05610 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.18 | Archaeplastida | |
AT3G06830 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.16 | Archaeplastida | |
AT3G10710 | RHS12 | root hair specific 12 | 0.04 | Archaeplastida | |
AT4G15980 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.09 | Archaeplastida | |
AT4G33230 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.17 | Archaeplastida | |
AT5G04960 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | Archaeplastida | |
AT5G27870 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.11 | Archaeplastida | |
GSVIVT01017687001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.07 | Archaeplastida | |
GSVIVT01028041001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01028264001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.13 | Archaeplastida | |
GSVIVT01028265001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.15 | Archaeplastida | |
GSVIVT01031164001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01031165001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.15 | Archaeplastida | |
GSVIVT01035108001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
Gb_06356 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Gb_36012 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os01g21034.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os03g18860.1 | No alias | pectin methylesterase | 0.09 | Archaeplastida | |
LOC_Os04g38560.1 | No alias | pectin methylesterase | 0.11 | Archaeplastida | |
LOC_Os04g54850.1 | No alias | pectin methylesterase | 0.09 | Archaeplastida | |
LOC_Os07g49100.1 | No alias | pectin methylesterase | 0.11 | Archaeplastida | |
LOC_Os08g34910.1 | No alias | pectin methylesterase | 0.17 | Archaeplastida | |
LOC_Os09g26360.1 | No alias | pectin methylesterase | 0.09 | Archaeplastida | |
MA_10427058g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_26888g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_84680g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Pp3c17_6440V3.1 | No alias | pectin methylesterase PCR fragment F | 0.02 | Archaeplastida | |
Pp3c18_170V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Pp3c26_2170V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Pp3c4_22420V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Smo154356 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
Smo89509 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
Solyc01g057220.3.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Solyc07g017600.3.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc09g075330.4.1 | No alias | pectin methylesterase | 0.01 | Archaeplastida | |
Zm00001e004056_P002 | No alias | no hits & (original description: none) | 0.16 | Archaeplastida | |
Zm00001e006791_P001 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Zm00001e007917_P002 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Zm00001e009863_P001 | No alias | pectin methylesterase | 0.12 | Archaeplastida | |
Zm00001e034231_P001 | No alias | pectin methylesterase | 0.15 | Archaeplastida | |
Zm00001e035932_P003 | No alias | pectin methylesterase | 0.12 | Archaeplastida | |
Zm00001e041006_P001 | No alias | pectin methylesterase | 0.16 | Archaeplastida | |
Zm00001e041757_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0003774 | motor activity | IEP | Neighborhood |
MF | GO:0003777 | microtubule motor activity | IEP | Neighborhood |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
MF | GO:0004650 | polygalacturonase activity | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0004857 | enzyme inhibitor activity | IEP | Neighborhood |
MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005507 | copper ion binding | IEP | Neighborhood |
MF | GO:0005509 | calcium ion binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
MF | GO:0005543 | phospholipid binding | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006629 | lipid metabolic process | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0006928 | movement of cell or subcellular component | IEP | Neighborhood |
BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
BP | GO:0007018 | microtubule-based movement | IEP | Neighborhood |
MF | GO:0008017 | microtubule binding | IEP | Neighborhood |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
MF | GO:0008289 | lipid binding | IEP | Neighborhood |
BP | GO:0009606 | tropism | IEP | Neighborhood |
BP | GO:0010215 | cellulose microfibril organization | IEP | Neighborhood |
BP | GO:0010274 | hydrotropism | IEP | Neighborhood |
MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015631 | tubulin binding | IEP | Neighborhood |
BP | GO:0015693 | magnesium ion transport | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
CC | GO:0016459 | myosin complex | IEP | Neighborhood |
MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
MF | GO:0016829 | lyase activity | IEP | Neighborhood |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Neighborhood |
MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | Neighborhood |
MF | GO:0017048 | Rho GTPase binding | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
BP | GO:0030198 | extracellular matrix organization | IEP | Neighborhood |
MF | GO:0030234 | enzyme regulator activity | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
MF | GO:0030570 | pectate lyase activity | IEP | Neighborhood |
CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
BP | GO:0043062 | extracellular structure organization | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0070838 | divalent metal ion transport | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
BP | GO:0072511 | divalent inorganic cation transport | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:0098772 | molecular function regulator | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000070 | Pectinesterase_cat | 83 | 377 |
No external refs found! |