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  5. Solyc07g019493.1.1

Solyc07g019493.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 148.0)


Gene families : OG0000177 (Archaeplastida) Phylogenetic Tree(s): OG0000177_tree ,
OG_05_0000071 (LandPlants) Phylogenetic Tree(s): OG_05_0000071_tree ,
OG_06_0000026 (SeedPlants) Phylogenetic Tree(s): OG_06_0000026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g019493.1.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Solyc00g500094.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc01g009165.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.11 Archaeplastida
Solyc01g065625.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc01g065987.1.1 No alias No annotation 0.2 Archaeplastida
Solyc01g067045.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc02g062045.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc03g031487.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc03g083485.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc03g111705.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Solyc03g119905.1.1 No alias no hits & (original description: none) 0.14 Archaeplastida
Solyc03g150108.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc04g007855.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc04g150127.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc04g150146.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Solyc05g050825.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.02 Archaeplastida
Solyc06g034395.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc06g035495.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Solyc06g036255.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc06g048713.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.1 Archaeplastida
Solyc07g044985.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 Archaeplastida
Solyc08g062725.1.1 No alias No annotation 0.01 Archaeplastida
Solyc08g065543.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc08g067025.1.1 No alias No annotation 0.01 Archaeplastida
Solyc08g074655.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc09g074575.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.12 Archaeplastida
Solyc09g150145.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.14 Archaeplastida
Solyc10g008455.1.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Solyc10g018203.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc10g038045.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Solyc11g012995.1.1 No alias No annotation 0.04 Archaeplastida
Solyc11g027895.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.03 Archaeplastida
Solyc11g056595.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.04 Archaeplastida
Solyc12g011233.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!