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  5. Solyc07g041230.3.1

Solyc07g041230.3.1


Description : Protein Brevis radix-like 4 OS=Arabidopsis thaliana (sp|q8gz92|brxl4_arath : 381.0)


Gene families : OG0001106 (Archaeplastida) Phylogenetic Tree(s): OG0001106_tree ,
OG_05_0000672 (LandPlants) Phylogenetic Tree(s): OG_05_0000672_tree ,
OG_06_0000629 (SeedPlants) Phylogenetic Tree(s): OG_06_0000629_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g041230.3.1
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00209000 evm_27.TU.AmTr_v1... Protein BREVIS RADIX OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01015117001 No alias Protein Brevis radix-like 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01016782001 No alias Protein Brevis radix-like 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os03g63650.1 No alias Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os09g27230.1 No alias Protein Brevis radix-like 1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
MA_6175g0020 No alias Protein Brevis radix-like 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_651632g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_7983842g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g24560.1 No alias Protein BREVIS RADIX OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g096110.3.1 No alias Protein BREVIS RADIX OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e006397_P001 No alias Protein Brevis radix-like 4 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e007054_P001 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.06 Archaeplastida
Zm00001e015552_P003 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e041570_P002 No alias Protein Brevis radix-like 2 OS=Oryza sativa subsp.... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 309 364
IPR013591 Brevis_radix_dom 136 190
IPR027988 BRX_N 30 58
No external refs found!