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  5. Solyc07g041650.3.1

Solyc07g041650.3.1


Description : Exopolygalacturonase (Fragment) OS=Platanus acerifolia (sp|q6h9k0|pglr2_plaac : 305.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 240.1)


Gene families : OG0000535 (Archaeplastida) Phylogenetic Tree(s): OG0000535_tree ,
OG_05_0000281 (LandPlants) Phylogenetic Tree(s): OG_05_0000281_tree ,
OG_06_0000124 (SeedPlants) Phylogenetic Tree(s): OG_06_0000124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g041650.3.1
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030020001 No alias No description available 0.03 Archaeplastida
GSVIVT01030030001 No alias Polygalacturonase OS=Gossypium hirsutum 0.04 Archaeplastida
Zm00001e002846_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 Archaeplastida
Zm00001e022246_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 54 369
No external refs found!