1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g042130.4.1

Solyc07g042130.4.1


Description : no hits & (original description: none)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000075 (LandPlants) Phylogenetic Tree(s): OG_05_0000075_tree ,
OG_06_0000024 (SeedPlants) Phylogenetic Tree(s): OG_06_0000024_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g042130.4.1
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00248070 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g33680... 0.04 Archaeplastida
AT1G22830 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
AT3G14330 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.1 Archaeplastida
GSVIVT01010869001 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
GSVIVT01033654001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.08 Archaeplastida
LOC_Os01g62910.1 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.05 Archaeplastida
LOC_Os11g29360.1 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.03 Archaeplastida
MA_71104g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.05 Archaeplastida
MA_812716g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 Archaeplastida
Smo151406 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
Smo47998 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.02 Archaeplastida
Smo72231 No alias Pentatricopeptide repeat-containing protein At4g20770... 0.03 Archaeplastida
Zm00001e019452_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e039305_P001 No alias RNA editing factor (MEF13) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009435 NAD biosynthetic process IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Neighborhood
BP GO:0019362 pyridine nucleotide metabolic process IEP Neighborhood
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Neighborhood
BP GO:0019674 NAD metabolic process IEP Neighborhood
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0072524 pyridine-containing compound metabolic process IEP Neighborhood
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!