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  5. Solyc07g042220.2.1

Solyc07g042220.2.1


Description : beta-galactosidase (BGAL)


Gene families : OG0000133 (Archaeplastida) Phylogenetic Tree(s): OG0000133_tree ,
OG_05_0000245 (LandPlants) Phylogenetic Tree(s): OG_05_0000245_tree ,
OG_06_0001075 (SeedPlants) Phylogenetic Tree(s): OG_06_0001075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g042220.2.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00138p00054750 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
AMTR_s00175p00032740 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
AT2G16730 BGAL13 glycosyl hydrolase family 35 protein 0.03 Archaeplastida
AT3G53080 No alias D-galactoside/L-rhamnose binding SUEL lectin protein 0.02 Archaeplastida
AT5G20710 BGAL7 beta-galactosidase 7 0.03 Archaeplastida
GSVIVT01005849001 No alias Beta-galactosidase 6 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
GSVIVT01006709001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
GSVIVT01012605001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
GSVIVT01015038001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
GSVIVT01015203001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
LOC_Os06g37560.1 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
LOC_Os06g42310.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
LOC_Os09g36810.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
LOC_Os10g18400.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
LOC_Os10g19960.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
MA_10429233g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10436863g0010 No alias Beta-galactosidase 3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_14774g0010 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
MA_168609g0010 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
MA_665188g0010 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
MA_87238g0010 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Pp3c9_9350V3.1 No alias beta galactosidase 9 0.02 Archaeplastida
Solyc03g019890.3.1 No alias 1,2-beta-galactosidase. beta-galactosidase (BGAL) 0.02 Archaeplastida
Zm00001e003992_P005 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e013679_P001 No alias Beta-galactosidase 12 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR000922 Lectin_gal-bd_dom 741 818
IPR031330 Gly_Hdrlase_35_cat 29 332
No external refs found!