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  5. Solyc07g045455.1.1

Solyc07g045455.1.1


Description : No annotation


Gene families : OG0000100 (Archaeplastida) Phylogenetic Tree(s): OG0000100_tree ,
OG_05_0000036 (LandPlants) Phylogenetic Tree(s): OG_05_0000036_tree ,
OG_06_0000011 (SeedPlants) Phylogenetic Tree(s): OG_06_0000011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g045455.1.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Solyc01g015133.1.1 No alias No annotation 0.06 Archaeplastida
Solyc01g028985.1.1 No alias No annotation 0.03 Archaeplastida
Solyc01g058685.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc02g150117.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.17 Archaeplastida
Solyc03g033755.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g079887.1.1 No alias No annotation 0.17 Archaeplastida
Solyc03g082515.1.1 No alias No annotation 0.11 Archaeplastida
Solyc04g005015.1.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Solyc04g074195.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 Archaeplastida
Solyc05g016717.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.12 Archaeplastida
Solyc06g050135.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.06 Archaeplastida
Solyc07g018325.1.1 No alias No annotation 0.01 Archaeplastida
Solyc07g040905.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.01 Archaeplastida
Solyc07g043485.1.1 No alias No annotation 0.17 Archaeplastida
Solyc07g056702.1.1 No alias No annotation 0.07 Archaeplastida
Solyc07g061865.1.1 No alias No annotation 0.01 Archaeplastida
Solyc08g042065.1.1 No alias No annotation 0.01 Archaeplastida
Solyc08g065695.1.1 No alias No annotation 0.08 Archaeplastida
Solyc08g066495.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc09g059748.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc10g024387.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.01 Archaeplastida
Solyc10g047767.1.1 No alias No annotation 0.02 Archaeplastida
Solyc10g049287.1.1 No alias No annotation 0.17 Archaeplastida
Solyc11g020847.1.1 No alias No annotation 0.01 Archaeplastida
Solyc11g045338.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.04 Archaeplastida
Solyc12g036475.1.1 No alias No annotation 0.02 Archaeplastida
Solyc12g040817.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.01 Archaeplastida
Solyc12g077525.1.1 No alias No annotation 0.02 Archaeplastida
Solyc12g150112.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!