Description : DNA topoisomerase (TOP1)
Gene families : OG0003801 (Archaeplastida) Phylogenetic Tree(s): OG0003801_tree ,
OG_05_0003801 (LandPlants) Phylogenetic Tree(s): OG_05_0003801_tree ,
OG_06_0004899 (SeedPlants) Phylogenetic Tree(s): OG_06_0004899_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc07g049720.4.1 | |
Cluster | HCCA: Cluster_233 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00059p00193620 | evm_27.TU.AmTr_v1... | Cell cycle.interphase.DNA replication.preinitiation.TOP1... | 0.04 | Archaeplastida | |
AT5G55300 | MGO1, TOP1, TOP1ALPHA | DNA topoisomerase I alpha | 0.06 | Archaeplastida | |
GSVIVT01020301001 | No alias | Cell cycle.interphase.DNA replication.preinitiation.TOP1... | 0.06 | Archaeplastida | |
Gb_13084 | No alias | DNA topoisomerase (TOP1) | 0.04 | Archaeplastida | |
LOC_Os08g05840.1 | No alias | DNA topoisomerase (TOP1) | 0.04 | Archaeplastida | |
MA_120434g0010 | No alias | DNA topoisomerase (TOP1) | 0.03 | Archaeplastida | |
Pp3c13_14620V3.1 | No alias | DNA topoisomerase 1 beta | 0.04 | Archaeplastida | |
Pp3c3_12300V3.1 | No alias | DNA topoisomerase 1 beta | 0.07 | Archaeplastida | |
Smo145504 | No alias | Cell cycle.interphase.DNA replication.preinitiation.TOP1... | 0.06 | Archaeplastida | |
Zm00001e021739_P002 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003917 | DNA topoisomerase type I activity | IEA | Interproscan |
BP | GO:0006265 | DNA topological change | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001510 | RNA methylation | IEP | Neighborhood |
MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
CC | GO:0005669 | transcription factor TFIID complex | IEP | Neighborhood |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
BP | GO:0016556 | mRNA modification | IEP | Neighborhood |
BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
BP | GO:0080009 | mRNA methylation | IEP | Neighborhood |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
No external refs found! |