AT1G43770

Description : RING/FYVE/PHD zinc finger superfamily protein

Gene families : OG0001085 (Archaeplastida) Phylogenetic Tree(s): OG0001085_tree ,
OG_05_0000943 (LandPlants) Phylogenetic Tree(s): OG_05_0000943_tree ,
OG_06_0002303 (SeedPlants) Phylogenetic Tree(s): OG_06_0002303_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G43770

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT3G02890	No alias	RING/FYVE/PHD zinc finger superfamily protein	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000003	reproduction	IEP	Neighborhood
BP	GO:0000280	nuclear division	IEP	Neighborhood
BP	GO:0000723	telomere maintenance	IEP	Neighborhood
BP	GO:0000724	double-strand break repair via homologous recombination	IEP	Neighborhood
BP	GO:0000725	recombinational repair	IEP	Neighborhood
CC	GO:0000785	chromatin	IEP	Neighborhood
CC	GO:0000790	nuclear chromatin	IEP	Neighborhood
BP	GO:0001932	regulation of protein phosphorylation	IEP	Neighborhood
MF	GO:0004607	phosphatidylcholine-sterol O-acyltransferase activity	IEP	Neighborhood
CC	GO:0005956	protein kinase CK2 complex	IEP	Neighborhood
BP	GO:0006312	mitotic recombination	IEP	Neighborhood
BP	GO:0006706	steroid catabolic process	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
BP	GO:0007050	cell cycle arrest	IEP	Neighborhood
BP	GO:0007127	meiosis I	IEP	Neighborhood
BP	GO:0007129	synapsis	IEP	Neighborhood
BP	GO:0007140	male meiotic nuclear division	IEP	Neighborhood
BP	GO:0007141	male meiosis I	IEP	Neighborhood
BP	GO:0007276	gamete generation	IEP	Neighborhood
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
BP	GO:0009560	embryo sac egg cell differentiation	IEP	Neighborhood
BP	GO:0009791	post-embryonic development	IEP	Neighborhood
BP	GO:0010050	vegetative phase change	IEP	Neighborhood
BP	GO:0010150	leaf senescence	IEP	Neighborhood
BP	GO:0010212	response to ionizing radiation	IEP	Neighborhood
BP	GO:0010332	response to gamma radiation	IEP	Neighborhood
BP	GO:0016127	sterol catabolic process	IEP	Neighborhood
BP	GO:0016444	somatic cell DNA recombination	IEP	Neighborhood
MF	GO:0017005	3'-tyrosyl-DNA phosphodiesterase activity	IEP	Neighborhood
MF	GO:0019207	kinase regulator activity	IEP	Neighborhood
MF	GO:0019887	protein kinase regulator activity	IEP	Neighborhood
BP	GO:0022402	cell cycle process	IEP	Neighborhood
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	Neighborhood
BP	GO:0030154	cell differentiation	IEP	Neighborhood
BP	GO:0032200	telomere organization	IEP	Neighborhood
BP	GO:0032204	regulation of telomere maintenance	IEP	Neighborhood
BP	GO:0032504	multicellular organism reproduction	IEP	Neighborhood
BP	GO:0034433	steroid esterification	IEP	Neighborhood
BP	GO:0034434	sterol esterification	IEP	Neighborhood
BP	GO:0042138	meiotic DNA double-strand break formation	IEP	Neighborhood
BP	GO:0042325	regulation of phosphorylation	IEP	Neighborhood
BP	GO:0043247	telomere maintenance in response to DNA damage	IEP	Neighborhood
BP	GO:0043549	regulation of kinase activity	IEP	Neighborhood
CC	GO:0044427	chromosomal part	IEP	Neighborhood
CC	GO:0044454	nuclear chromosome part	IEP	Neighborhood
BP	GO:0045786	negative regulation of cell cycle	IEP	Neighborhood
BP	GO:0045859	regulation of protein kinase activity	IEP	Neighborhood
BP	GO:0048232	male gamete generation	IEP	Neighborhood
BP	GO:0051026	chiasma assembly	IEP	Neighborhood
BP	GO:0051338	regulation of transferase activity	IEP	Neighborhood
BP	GO:0060249	anatomical structure homeostasis	IEP	Neighborhood
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	IEP	Neighborhood
MF	GO:0070259	tyrosyl-DNA phosphodiesterase activity	IEP	Neighborhood
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0080095	phosphatidylethanolamine-sterol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0080096	phosphatidate-sterol O-acyltransferase activity	IEP	Neighborhood
BP	GO:0090693	plant organ senescence	IEP	Neighborhood
BP	GO:0140013	meiotic nuclear division	IEP	Neighborhood
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Neighborhood
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G43770

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation