Solyc07g052913.1.1


Description : no hits & (original description: none)


Gene families : OG0008358 (Archaeplastida) Phylogenetic Tree(s): OG0008358_tree ,
OG_05_0008564 (LandPlants) Phylogenetic Tree(s): OG_05_0008564_tree ,
OG_06_0006474 (SeedPlants) Phylogenetic Tree(s): OG_06_0006474_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g052913.1.1
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g15448.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Neighborhood
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0001012 RNA polymerase II regulatory region DNA binding IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007033 vacuole organization IEP Neighborhood
BP GO:0016093 polyprenol metabolic process IEP Neighborhood
BP GO:0019348 dolichol metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
MF GO:0032422 purine-rich negative regulatory element binding IEP Neighborhood
BP GO:0034227 tRNA thio-modification IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051382 kinetochore assembly IEP Neighborhood
BP GO:0051383 kinetochore organization IEP Neighborhood
CC GO:0070469 respiratory chain IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:1905037 autophagosome organization IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!