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  5. Solyc07g053040.3.1

Solyc07g053040.3.1


Description : Putative F-box/FBD/LRR-repeat protein At4g03220 OS=Arabidopsis thaliana (sp|q9zr09|fdl25_arath : 388.0)


Gene families : OG0020935 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0020623 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0019853 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g053040.3.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT4G03220 No alias Protein with RNI-like/FBD-like domains 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 25 61
IPR006566 FBD 448 489
No external refs found!