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  5. Solyc07g053240.3.1

Solyc07g053240.3.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0019530 (LandPlants) Phylogenetic Tree(s): OG_05_0019530_tree ,
OG_06_0018876 (SeedPlants) Phylogenetic Tree(s): OG_06_0018876_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g053240.3.1
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00257990 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00010p00267100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00032p00057800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00032p00221670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00049p00074250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G08810 MYB60, AtMYB60 myb domain protein 60 0.03 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.03 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.03 Archaeplastida
AT1G35515 MYB8, HOS10 high response to osmotic stress 10 0.04 Archaeplastida
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.03 Archaeplastida
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.03 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.02 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.04 Archaeplastida
AT4G28110 MYB41, AtMYB41 myb domain protein 41 0.04 Archaeplastida
AT5G16770 MYB9, AtMYB9 myb domain protein 9 0.03 Archaeplastida
AT5G65790 MYB68, ATMYB68 myb domain protein 68 0.05 Archaeplastida
GSVIVT01000232001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01004317001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01007981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01012447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01018577001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01019967001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028984001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01031496001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01032088001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01032452001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01032564001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01035041001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01036712001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
Gb_00379 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_02423 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_05115 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_06298 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_09986 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_22883 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_22885 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_40628 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g41510.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g46610.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os06g02250.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g24800.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10427849g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_55123g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_62488g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_6393g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_64405g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_7115g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc01g010910.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g008250.2.1 No alias transcription factor (MYB) 0.08 Archaeplastida
Solyc05g051550.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g053330.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g074920.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc10g081490.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e009831_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024037_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024606_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e034118_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e035025_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 110
IPR001005 SANT/Myb 14 61
No external refs found!