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  5. Solyc07g053350.4.1

Solyc07g053350.4.1


Description : Protein trichome birefringence-like 39 OS=Arabidopsis thaliana (sp|q9sin2|tbl39_arath : 470.0)


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000413 (LandPlants) Phylogenetic Tree(s): OG_05_0000413_tree ,
OG_06_0000213 (SeedPlants) Phylogenetic Tree(s): OG_06_0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g053350.4.1
Cluster HCCA: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00137180 evm_27.TU.AmTr_v1... Protein PMR5 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00021p00123440 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 31 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G73140 TBL31 Plant protein of unknown function (DUF828) 0.03 Archaeplastida
AT2G31110 TBL40 Plant protein of unknown function (DUF828) 0.04 Archaeplastida
AT2G34070 TBL37 TRICHOME BIREFRINGENCE-LIKE 37 0.04 Archaeplastida
AT2G40320 TBL33 TRICHOME BIREFRINGENCE-LIKE 33 0.03 Archaeplastida
AT3G55990 ESK1, TBL29 Plant protein of unknown function (DUF828) 0.03 Archaeplastida
AT5G01360 TBL3 Plant protein of unknown function (DUF828) 0.03 Archaeplastida
GSVIVT01000843001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020723001 No alias Protein trichome birefringence-like 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01021192001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01028123001 No alias Protein trichome birefringence-like 6 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032800001 No alias Cell wall.hemicellulose.xylan.modification and... 0.02 Archaeplastida
Gb_10738 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_34157 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
LOC_Os03g18120.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os07g46230.1 No alias Protein trichome birefringence-like 11 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os11g01370.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc01g060270.1.1 No alias Protein trichome birefringence-like 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc01g079400.3.1 No alias Protein trichome birefringence-like 6 OS=Arabidopsis... 0.04 Archaeplastida
Solyc05g052440.2.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
Solyc07g055730.4.1 No alias Protein trichome birefringence-like 43 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e001317_P001 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e019393_P001 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e027860_P001 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 44 96
IPR026057 PC-Esterase 97 359
No external refs found!