Solyc07g053920.3.1

Description : endo-beta-1,4-mannanase

Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0002581 (SeedPlants) Phylogenetic Tree(s): OG_06_0002581_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g053920.3.1
Cluster	HCCA: Cluster_248

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00158370	evm_27.TU.AmTr_v1...	Cell wall.hemicellulose.heteromannan.modification and...	0.03	Archaeplastida
AMTR_s00011p00202020	evm_27.TU.AmTr_v1...	Cell wall.hemicellulose.heteromannan.modification and...	0.07	Archaeplastida
AMTR_s00077p00136900	evm_27.TU.AmTr_v1...	Cell wall.hemicellulose.heteromannan.modification and...	0.05	Archaeplastida
AT5G66460	AtMAN7, MAN7	Glycosyl hydrolase superfamily protein	0.04	Archaeplastida
GSVIVT01009746001	No alias	Cell wall.hemicellulose.heteromannan.modification and...	0.04	Archaeplastida
GSVIVT01020553001	No alias	Cell wall.hemicellulose.heteromannan.modification and...	0.02	Archaeplastida
GSVIVT01030165001	No alias	Cell wall.hemicellulose.heteromannan.modification and...	0.03	Archaeplastida
GSVIVT01037212001	No alias	Cell wall.hemicellulose.heteromannan.modification and...	0.04	Archaeplastida
GSVIVT01037214001	No alias	Cell wall.hemicellulose.heteromannan.modification and...	0.04	Archaeplastida
GSVIVT01037215001	No alias	Cell wall.hemicellulose.heteromannan.modification and...	0.02	Archaeplastida
Gb_08848	No alias	endo-beta-1,4-mannanase	0.1	Archaeplastida
Gb_28909	No alias	endo-beta-1,4-mannanase	0.07	Archaeplastida
Gb_30579	No alias	endo-beta-1,4-mannanase	0.1	Archaeplastida
Gb_33018	No alias	endo-beta-1,4-mannanase	0.09	Archaeplastida
LOC_Os01g47400.1	No alias	endo-beta-1,4-mannanase	0.05	Archaeplastida
LOC_Os01g54300.1	No alias	endo-beta-1,4-mannanase	0.01	Archaeplastida
MA_10358593g0010	No alias	no hits & (original description: none)	0.07	Archaeplastida
MA_10426380g0010	No alias	endo-beta-1,4-mannanase	0.05	Archaeplastida
MA_10433157g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_10436185g0010	No alias	Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis...	0.08	Archaeplastida
MA_111906g0010	No alias	endo-beta-1,4-mannanase	0.02	Archaeplastida
MA_38956g0010	No alias	endo-beta-1,4-mannanase	0.04	Archaeplastida
MA_6558g0010	No alias	endo-beta-1,4-mannanase	0.05	Archaeplastida
MA_71720g0010	No alias	endo-beta-1,4-mannanase	0.08	Archaeplastida
MA_8194133g0010	No alias	Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis...	0.1	Archaeplastida
MA_953274g0010	No alias	No annotation	0.03	Archaeplastida
Mp8g13360.1	No alias	endo-beta-1,4-mannanase	0.03	Archaeplastida
Mp8g13380.1	No alias	endo-beta-1,4-mannanase	0.02	Archaeplastida
Pp3c4_28130V3.1	No alias	Glycosyl hydrolase superfamily protein	0.02	Archaeplastida
Pp3c5_23790V3.1	No alias	Glycosyl hydrolase superfamily protein	0.05	Archaeplastida
Smo101148	No alias	Cell wall.hemicellulose.heteromannan.modification and...	0.06	Archaeplastida
Smo101525	No alias	Cell wall.hemicellulose.heteromannan.modification and...	0.03	Archaeplastida
Smo234867	No alias	Cell wall.hemicellulose.heteromannan.modification and...	0.02	Archaeplastida
Solyc10g008300.3.1	No alias	endo-beta-1,4-mannanase	0.03	Archaeplastida
Zm00001e019799_P001	No alias	No annotation	0.08	Archaeplastida
Zm00001e020240_P001	No alias	endo-beta-1,4-mannanase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0001932	regulation of protein phosphorylation	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
CC	GO:0005856	cytoskeleton	IEP	Neighborhood
CC	GO:0005885	Arp2/3 protein complex	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0005985	sucrose metabolic process	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0007015	actin filament organization	IEP	Neighborhood
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
BP	GO:0008272	sulfate transport	IEP	Neighborhood
BP	GO:0009250	glucan biosynthetic process	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
BP	GO:0010638	positive regulation of organelle organization	IEP	Neighborhood
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	Neighborhood
MF	GO:0015020	glucuronosyltransferase activity	IEP	Neighborhood
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Neighborhood
CC	GO:0015629	actin cytoskeleton	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0016157	sucrose synthase activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016759	cellulose synthase activity	IEP	Neighborhood
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Neighborhood
MF	GO:0019900	kinase binding	IEP	Neighborhood
MF	GO:0019901	protein kinase binding	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
BP	GO:0030244	cellulose biosynthetic process	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
BP	GO:0030832	regulation of actin filament length	IEP	Neighborhood
BP	GO:0030833	regulation of actin filament polymerization	IEP	Neighborhood
BP	GO:0030838	positive regulation of actin filament polymerization	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
BP	GO:0031334	positive regulation of protein complex assembly	IEP	Neighborhood
BP	GO:0031399	regulation of protein modification process	IEP	Neighborhood
BP	GO:0032271	regulation of protein polymerization	IEP	Neighborhood
BP	GO:0032273	positive regulation of protein polymerization	IEP	Neighborhood
BP	GO:0032535	regulation of cellular component size	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Neighborhood
BP	GO:0032970	regulation of actin filament-based process	IEP	Neighborhood
BP	GO:0033043	regulation of organelle organization	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0034314	Arp2/3 complex-mediated actin nucleation	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0042325	regulation of phosphorylation	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0043254	regulation of protein complex assembly	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0043549	regulation of kinase activity	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044089	positive regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0045010	actin nucleation	IEP	Neighborhood
BP	GO:0045859	regulation of protein kinase activity	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0048522	positive regulation of cellular process	IEP	Neighborhood
BP	GO:0051130	positive regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0051338	regulation of transferase activity	IEP	Neighborhood
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Neighborhood
BP	GO:0051495	positive regulation of cytoskeleton organization	IEP	Neighborhood
MF	GO:0070569	uridylyltransferase activity	IEP	Neighborhood
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Neighborhood
BP	GO:0072348	sulfur compound transport	IEP	Neighborhood
BP	GO:0090066	regulation of anatomical structure size	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
BP	GO:0097435	supramolecular fiber organization	IEP	Neighborhood
BP	GO:0110053	regulation of actin filament organization	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Neighborhood
BP	GO:1902905	positive regulation of supramolecular fiber organization	IEP	Neighborhood
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001547	Glyco_hydro_5	79	384

External Links

No external refs found!

Solyc07g053920.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation