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  5. Solyc07g053950.1.1

Solyc07g053950.1.1


Description : no hits & (original description: none)


Gene families : OG0006390 (Archaeplastida) Phylogenetic Tree(s): OG0006390_tree ,
OG_05_0004686 (LandPlants) Phylogenetic Tree(s): OG_05_0004686_tree ,
OG_06_0004054 (SeedPlants) Phylogenetic Tree(s): OG_06_0004054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g053950.1.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00029360 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AT4G28310 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.18 Archaeplastida
GSVIVT01020552001 No alias No description available 0.16 Archaeplastida
Gb_35558 No alias no hits & (original description: none) 0.2 Archaeplastida
Gb_35559 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os06g02530.1 No alias no hits & (original description: none) 0.19 Archaeplastida
MA_57579g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_65418g0010 No alias no hits & (original description: none) 0.12 Archaeplastida
MA_7129g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
Mp5g00160.1 No alias no hits & (original description: none) 0.12 Archaeplastida
Pp3c17_13330V3.1 No alias No annotation 0.02 Archaeplastida
Zm00001e029849_P001 No alias no hits & (original description: none) 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042575 DNA polymerase complex IEP Neighborhood
CC GO:0043625 delta DNA polymerase complex IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!