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  5. Solyc07g054250.2.1

Solyc07g054250.2.1


Description : NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana (sp|q8ld98|nhl6_arath : 84.3)


Gene families : OG0000075 (Archaeplastida) Phylogenetic Tree(s): OG0000075_tree ,
OG_05_0000224 (LandPlants) Phylogenetic Tree(s): OG_05_0000224_tree ,
OG_06_0087634 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g054250.2.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00244400 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00010p00185810 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00140p00027980 evm_27.TU.AmTr_v1... Uncharacterized protein At1g08160 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT5G06320 NHL3 NDR1/HIN1-like 3 0.03 Archaeplastida
Gb_26589 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g09460.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_47856g0010 No alias NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c12_2240V3.1 No alias NDR1/HIN1-like 3 0.03 Archaeplastida
Zm00001e006487_P001 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e009420_P001 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e040847_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
BP GO:0019310 inositol catabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004864 LEA_2 145 233
No external refs found!