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  5. Solyc07g054740.3.1

Solyc07g054740.3.1


Description : Vesicle-associated protein 4-2 OS=Arabidopsis thaliana (sp|q8vyn2|vap42_arath : 282.0)


Gene families : OG0002114 (Archaeplastida) Phylogenetic Tree(s): OG0002114_tree ,
OG_05_0002170 (LandPlants) Phylogenetic Tree(s): OG_05_0002170_tree ,
OG_06_0004173 (SeedPlants) Phylogenetic Tree(s): OG_06_0004173_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g054740.3.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
MA_8558083g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Mp3g16880.1 No alias Vesicle-associated protein 4-1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c21_16180V3.1 No alias PapD-like superfamily protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR000535 MSP_dom 80 188
No external refs found!