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  5. Solyc07g055800.2.1

Solyc07g055800.2.1


Description : Protein trichome birefringence-like 43 OS=Arabidopsis thaliana (sp|q6dr10|tbl43_arath : 324.0)


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000413 (LandPlants) Phylogenetic Tree(s): OG_05_0000413_tree ,
OG_06_0024423 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g055800.2.1
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00131340 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xylan.modification and... 0.02 Archaeplastida
AT2G38320 TBL34 TRICHOME BIREFRINGENCE-LIKE 34 0.03 Archaeplastida
AT2G42570 TBL39 TRICHOME BIREFRINGENCE-LIKE 39 0.05 Archaeplastida
GSVIVT01011180001 No alias Protein trichome birefringence-like 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01014228001 No alias Protein trichome birefringence-like 31 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01032748001 No alias Protein trichome birefringence-like 33 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01032800001 No alias Cell wall.hemicellulose.xylan.modification and... 0.03 Archaeplastida
LOC_Os03g18110.1 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g18140.1 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
LOC_Os05g35190.1 No alias Protein trichome berefringence-like 7 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g11180.1 No alias rhamnogalacturonan-I O-acetyltransferase (TBL) 0.05 Archaeplastida
Zm00001e011775_P001 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e030698_P002 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 43 95
IPR026057 PC-Esterase 96 344
No external refs found!