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  5. Solyc07g056050.1.1

Solyc07g056050.1.1


Description : Transmembrane 9 superfamily member 12 OS=Arabidopsis thaliana (sp|f4jre0|tmn12_arath : 1091.0)


Gene families : OG0002745 (Archaeplastida) Phylogenetic Tree(s): OG0002745_tree ,
OG_05_0001932 (LandPlants) Phylogenetic Tree(s): OG_05_0001932_tree ,
OG_06_0001922 (SeedPlants) Phylogenetic Tree(s): OG_06_0001922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g056050.1.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AT4G12650 No alias Endomembrane protein 70 protein family 0.15 Archaeplastida
AT5G35160 No alias Endomembrane protein 70 protein family 0.08 Archaeplastida
Cre12.g494350 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01001034001 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.1 Archaeplastida
Gb_03733 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.07 Archaeplastida
Gb_09059 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os02g49050.2 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.07 Archaeplastida
LOC_Os02g55440.2 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os05g07650.1 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os08g38820.1 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.05 Archaeplastida
MA_371g0020 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.05 Archaeplastida
Mp6g10640.1 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c26_10670V3.1 No alias Endomembrane protein 70 protein family 0.02 Archaeplastida
Pp3c4_24700V3.1 No alias Endomembrane protein 70 protein family 0.09 Archaeplastida
Smo175941 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.07 Archaeplastida
Zm00001e015684_P003 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e016131_P001 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.1 Archaeplastida
Zm00001e023403_P001 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.08 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Neighborhood
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR004240 EMP70 59 611
No external refs found!