1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g056180.2.1

Solyc07g056180.2.1


Description : no hits & (original description: none)


Gene families : OG0001687 (Archaeplastida) Phylogenetic Tree(s): OG0001687_tree ,
OG_05_0001084 (LandPlants) Phylogenetic Tree(s): OG_05_0001084_tree ,
OG_06_0000612 (SeedPlants) Phylogenetic Tree(s): OG_06_0000612_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g056180.2.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00148300 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT4G05030 No alias Copper transport protein family 0.04 Archaeplastida
AT5G48290 No alias Heavy metal transport/detoxification superfamily protein 0.05 Archaeplastida
GSVIVT01003315001 No alias ATP-dependent 6-phosphofructokinase 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01003316001 No alias No description available 0.03 Archaeplastida
GSVIVT01014798001 No alias No description available 0.04 Archaeplastida
GSVIVT01030135001 No alias No description available 0.03 Archaeplastida
GSVIVT01030137001 No alias No description available 0.05 Archaeplastida
LOC_Os02g37280.1 No alias no description available(sp|f2vyu4|pik1_orysj : 88.6) 0.03 Archaeplastida
LOC_Os02g37290.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g37300.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g37320.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g37330.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g39360.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g39380.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g056190.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e014956_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Neighborhood
BP GO:0002831 regulation of response to biotic stimulus IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0010112 regulation of systemic acquired resistance IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0032101 regulation of response to external stimulus IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043900 regulation of multi-organism process IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!