1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g061760.3.1

Solyc07g061760.3.1


Description : Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana (sp|q6aww5|y5262_arath : 97.4)


Gene families : OG0000783 (Archaeplastida) Phylogenetic Tree(s): OG0000783_tree ,
OG_05_0003504 (LandPlants) Phylogenetic Tree(s): OG_05_0003504_tree ,
OG_06_0001659 (SeedPlants) Phylogenetic Tree(s): OG_06_0001659_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g061760.3.1
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00090220 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
Cpa|evm.model.tig00020904.171 No alias No description available 0.01 Archaeplastida
GSVIVT01001631001 No alias No description available 0.03 Archaeplastida
Gb_26483 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g14570.1 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os11g14630.1 No alias Ankyrin repeat-containing protein At2g01680... 0.03 Archaeplastida
LOC_Os11g15460.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc05g055960.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 43 107
IPR020683 Ankyrin_rpt-contain_dom 123 177
No external refs found!