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  5. Solyc07g062660.4.1

Solyc07g062660.4.1


Description : transcriptional co-activator (BET/GTE)


Gene families : OG0000250 (Archaeplastida) Phylogenetic Tree(s): OG0000250_tree ,
OG_05_0000330 (LandPlants) Phylogenetic Tree(s): OG_05_0000330_tree ,
OG_06_0000655 (SeedPlants) Phylogenetic Tree(s): OG_06_0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g062660.4.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00136760 evm_27.TU.AmTr_v1... Transcription factor GTE4 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00046p00231370 evm_27.TU.AmTr_v1... Transcription factor GTE7 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G06230 GTE4 global transcription factor group E4 0.04 Archaeplastida
Cre01.g048900 No alias No description available 0.02 Archaeplastida
Cre08.g367300 No alias Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01001835001 No alias Transcription factor GTE8 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01008492001 No alias Transcription factor GTE10 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01014233001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01020670001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01034328001 No alias Transcription factor GTE1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01038522001 No alias Transcription factor GTE7 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_04671 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Gb_30202 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
Gb_40751 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
LOC_Os01g11580.1 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
LOC_Os02g15220.2 No alias transcriptional co-activator (BET/GTE) 0.08 Archaeplastida
LOC_Os02g38980.1 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
LOC_Os08g03360.1 No alias Transcription factor GTE9 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10429630g0020 No alias Transcription factor GTE10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10435152g0020 No alias transcriptional co-activator (BET/GTE) 0.06 Archaeplastida
MA_18020g0010 No alias transcriptional co-activator (BET/GTE) 0.05 Archaeplastida
MA_87057g0010 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
Mp1g20280.1 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Mp2g14370.1 No alias transcriptional co-activator (BET/GTE) 0.05 Archaeplastida
Pp3c12_15290V3.1 No alias bromodomain and extraterminal domain protein 10 0.06 Archaeplastida
Pp3c12_15340V3.1 No alias DNA-binding bromodomain-containing protein 0.04 Archaeplastida
Zm00001e006897_P002 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
Zm00001e009037_P001 No alias transcriptional co-activator (BET/GTE) 0.07 Archaeplastida
Zm00001e014297_P001 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Zm00001e016462_P001 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Zm00001e021805_P005 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
Zm00001e024513_P001 No alias transcriptional co-activator (BET/GTE) 0.06 Archaeplastida
Zm00001e026041_P001 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
Zm00001e029260_P001 No alias transcriptional co-activator (BET/GTE) 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002098 tRNA wobble uridine modification IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006476 protein deacetylation IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016575 histone deacetylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0035601 protein deacylation IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
CC GO:0070652 HAUS complex IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0098732 macromolecule deacylation IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001487 Bromodomain 396 480
IPR027353 NET_dom 586 647
No external refs found!