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  5. Solyc07g063190.3.1

Solyc07g063190.3.1


Description : M-type thioredoxin


Gene families : OG0000516 (Archaeplastida) Phylogenetic Tree(s): OG0000516_tree ,
OG_05_0000996 (LandPlants) Phylogenetic Tree(s): OG_05_0000996_tree ,
OG_06_0001150 (SeedPlants) Phylogenetic Tree(s): OG_06_0001150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g063190.3.1
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00016000 evm_27.TU.AmTr_v1... Redox homeostasis.chloroplast redox homeostasis.M-type... 0.05 Archaeplastida
AT1G03680 ATHM1, THM1, TRX-M1, ATM1 thioredoxin M-type 1 0.07 Archaeplastida
AT1G50320 THX, ATHX, ATX thioredoxin X 0.08 Archaeplastida
AT3G15360 ATHM4, TRX-M4, ATM4 thioredoxin M-type 4 0.13 Archaeplastida
AT4G03520 ATHM2 Thioredoxin superfamily protein 0.06 Archaeplastida
Cpa|evm.model.tig00020563.189 No alias No description available 0.01 Archaeplastida
Cre01.g052250 No alias Redox homeostasis.chloroplast redox homeostasis.X-type... 0.03 Archaeplastida
GSVIVT01010012001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.04 Archaeplastida
GSVIVT01014360001 No alias Redox homeostasis.chloroplast redox homeostasis.M-type... 0.09 Archaeplastida
GSVIVT01026149001 No alias Redox homeostasis.chloroplast redox homeostasis.X-type... 0.06 Archaeplastida
GSVIVT01034548001 No alias Redox homeostasis.chloroplast redox homeostasis.Y-type... 0.04 Archaeplastida
Gb_00914 No alias M-type thioredoxin 0.07 Archaeplastida
Gb_31181 No alias M-type thioredoxin 0.03 Archaeplastida
LOC_Os04g57930.1 No alias X-type thioredoxin 0.05 Archaeplastida
LOC_Os12g08730.1 No alias M-type thioredoxin 0.03 Archaeplastida
MA_474303g0010 No alias M-type thioredoxin 0.04 Archaeplastida
Mp3g04790.1 No alias X-type thioredoxin 0.03 Archaeplastida
Mp4g18950.1 No alias M-type thioredoxin 0.09 Archaeplastida
Pp3c16_11170V3.1 No alias Thioredoxin superfamily protein 0.02 Archaeplastida
Pp3c24_4980V3.1 No alias thioredoxin X 0.05 Archaeplastida
Pp3c25_2880V3.1 No alias thioredoxin M-type 1 0.05 Archaeplastida
Pp3c5_23070V3.1 No alias thioredoxin M-type 1 0.08 Archaeplastida
Pp3c6_10040V3.1 No alias Thioredoxin superfamily protein 0.05 Archaeplastida
Smo74205 No alias Redox homeostasis.chloroplast redox homeostasis.Y-type... 0.02 Archaeplastida
Zm00001e006545_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e018385_P001 No alias M-type thioredoxin 0.08 Archaeplastida
Zm00001e039586_P001 No alias M-type thioredoxin 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0004325 ferrochelatase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0010242 oxygen evolving activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 79 179
No external refs found!