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  5. Solyc07g063230.3.1

Solyc07g063230.3.1


Description : Choline transporter protein 1 OS=Arabidopsis thaliana (sp|q94an2|cher1_arath : 1075.0)


Gene families : OG0003297 (Archaeplastida) Phylogenetic Tree(s): OG0003297_tree ,
OG_05_0005824 (LandPlants) Phylogenetic Tree(s): OG_05_0005824_tree ,
OG_06_0005335 (SeedPlants) Phylogenetic Tree(s): OG_06_0005335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g063230.3.1
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00264940 evm_27.TU.AmTr_v1... Choline transporter protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G15380 No alias Plasma-membrane choline transporter family protein 0.02 Archaeplastida
GSVIVT01014366001 No alias Choline transporter protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_03567 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_03568 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_10052 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os04g58470.1 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os04g58504.1 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_89558g0010 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c13_16790V3.1 No alias Plasma-membrane choline transporter family protein 0.02 Archaeplastida
Pp3c9_13290V3.1 No alias Plasma-membrane choline transporter family protein 0.02 Archaeplastida
Zm00001e006509_P001 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e024273_P001 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007603 Choline_transptr-like 328 671
No external refs found!