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  5. Solyc07g063970.3.1

Solyc07g063970.3.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000798 (Archaeplastida) Phylogenetic Tree(s): OG0000798_tree ,
OG_05_0000584 (LandPlants) Phylogenetic Tree(s): OG_05_0000584_tree ,
OG_06_0004434 (SeedPlants) Phylogenetic Tree(s): OG_06_0004434_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g063970.3.1
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00197580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G11490 No alias zinc finger (C2H2 type) family protein 0.01 Archaeplastida
AT4G27240 No alias zinc finger (C2H2 type) family protein 0.02 Archaeplastida
GSVIVT01008925001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Gb_25842 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_30270 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_32897 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os01g57650.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g15790.1 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
LOC_Os04g59380.1 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
LOC_Os11g06840.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_10426153g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e019606_P002 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!