Description : E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana (sp|q8gy23|upl1_arath : 2480.0)
Gene families : OG0001713 (Archaeplastida) Phylogenetic Tree(s): OG0001713_tree ,
OG_05_0001924 (LandPlants) Phylogenetic Tree(s): OG_05_0001924_tree ,
OG_06_0002093 (SeedPlants) Phylogenetic Tree(s): OG_06_0002093_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc07g065630.4.1 | |
Cluster | HCCA: Cluster_182 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00033p00211330 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.1 | Archaeplastida | |
AMTR_s00061p00204480 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.09 | Archaeplastida | |
AT1G55860 | UPL1 | ubiquitin-protein ligase 1 | 0.11 | Archaeplastida | |
AT1G70320 | UPL2 | ubiquitin-protein ligase 2 | 0.1 | Archaeplastida | |
Cre01.g012450 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.08 | Archaeplastida | |
GSVIVT01009206001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.09 | Archaeplastida | |
GSVIVT01009208001 | No alias | E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana | 0.16 | Archaeplastida | |
GSVIVT01014697001 | No alias | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana | 0.12 | Archaeplastida | |
GSVIVT01014698001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | Archaeplastida | |
Gb_17424 | No alias | monomeric E3 ubiquitin ligase (HECT) | 0.08 | Archaeplastida | |
Gb_21632 | No alias | monomeric E3 ubiquitin ligase (HECT) | 0.11 | Archaeplastida | |
Gb_26784 | No alias | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
Gb_26785 | No alias | monomeric E3 ubiquitin ligase (HECT) | 0.03 | Archaeplastida | |
LOC_Os12g24080.1 | No alias | monomeric E3 ubiquitin ligase (HECT) | 0.07 | Archaeplastida | |
MA_20049g0010 | No alias | monomeric E3 ubiquitin ligase (HECT) | 0.11 | Archaeplastida | |
MA_20049g0020 | No alias | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... | 0.14 | Archaeplastida | |
MA_7295g0020 | No alias | E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana... | 0.11 | Archaeplastida | |
Mp4g21620.1 | No alias | monomeric E3 ubiquitin ligase (HECT) | 0.09 | Archaeplastida | |
Pp3c11_25020V3.1 | No alias | ubiquitin-protein ligase 1 | 0.07 | Archaeplastida | |
Pp3c7_8070V3.1 | No alias | ubiquitin-protein ligase 1 | 0.07 | Archaeplastida | |
Pp3c7_8076V3.1 | No alias | ubiquitin-protein ligase 1 | 0.03 | Archaeplastida | |
Smo154179 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.09 | Archaeplastida | |
Zm00001e009321_P001 | No alias | monomeric E3 ubiquitin ligase (HECT) | 0.12 | Archaeplastida | |
Zm00001e017836_P002 | No alias | monomeric E3 ubiquitin ligase (HECT) | 0.2 | Archaeplastida | |
Zm00001e039654_P001 | No alias | monomeric E3 ubiquitin ligase (HECT) | 0.16 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Neighborhood |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Neighborhood |
MF | GO:0004402 | histone acetyltransferase activity | IEP | Neighborhood |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
BP | GO:0006402 | mRNA catabolic process | IEP | Neighborhood |
BP | GO:0006473 | protein acetylation | IEP | Neighborhood |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | Neighborhood |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
BP | GO:0016570 | histone modification | IEP | Neighborhood |
BP | GO:0016573 | histone acetylation | IEP | Neighborhood |
BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Neighborhood |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Neighborhood |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Neighborhood |
MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
MF | GO:0042393 | histone binding | IEP | Neighborhood |
BP | GO:0043248 | proteasome assembly | IEP | Neighborhood |
BP | GO:0043543 | protein acylation | IEP | Neighborhood |
BP | GO:0048519 | negative regulation of biological process | IEP | Neighborhood |
MF | GO:0060090 | molecular adaptor activity | IEP | Neighborhood |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Neighborhood |
BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
No external refs found! |