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  5. Solyc07g066650.4.1

Solyc07g066650.4.1


Description : RUB ligase E3 protein (DCN1)


Gene families : OG0000972 (Archaeplastida) Phylogenetic Tree(s): OG0000972_tree ,
OG_05_0001884 (LandPlants) Phylogenetic Tree(s): OG_05_0001884_tree ,
OG_06_0006504 (SeedPlants) Phylogenetic Tree(s): OG_06_0006504_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g066650.4.1
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00249420 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
Cre12.g487400 No alias Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 Archaeplastida
LOC_Os06g12690.1 No alias RUB ligase E3 protein (DCN1) 0.02 Archaeplastida
Pp3c10_17770V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c2_25160V3.1 No alias Domain of unknown function (DUF298) 0.03 Archaeplastida
Zm00001e004099_P008 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015920_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e022482_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016151 nickel cation binding IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005176 PONY_dom 130 241
No external refs found!