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  5. Solyc08g005270.3.1

Solyc08g005270.3.1


Description : Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana (sp|q8ry59|rcd1_arath : 424.0)


Gene families : OG0000979 (Archaeplastida) Phylogenetic Tree(s): OG0000979_tree ,
OG_05_0000648 (LandPlants) Phylogenetic Tree(s): OG_05_0000648_tree ,
OG_06_0000679 (SeedPlants) Phylogenetic Tree(s): OG_06_0000679_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005270.3.1
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00059840 evm_27.TU.AmTr_v1... Probable inactive poly [ADP-ribose] polymerase SRO1... 0.02 Archaeplastida
AMTR_s00048p00122750 evm_27.TU.AmTr_v1... Inactive poly [ADP-ribose] polymerase RCD1... 0.04 Archaeplastida
AT1G23550 SRO2 similar to RCD one 2 0.02 Archaeplastida
AT1G32230 AtRCD1, RCD1,... WWE protein-protein interaction domain protein family 0.05 Archaeplastida
Gb_12340 No alias Inactive poly [ADP-ribose] polymerase RCD1... 0.03 Archaeplastida
Gb_39925 No alias Inactive poly [ADP-ribose] polymerase RCD1... 0.03 Archaeplastida
LOC_Os03g63770.4 No alias Inactive poly [ADP-ribose] polymerase RCD1... 0.04 Archaeplastida
Zm00001e023927_P003 No alias Inactive poly [ADP-ribose] polymerase RCD1... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR022003 RST 513 577
No external refs found!