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  5. Solyc08g005440.3.1

Solyc08g005440.3.1


Description : RPM1 effector-triggered immunity CC-NLR-type effector receptor


Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005440.3.1
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00245940 evm_27.TU.AmTr_v1... Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00061p00086800 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00061p00165330 evm_27.TU.AmTr_v1... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00061p00205330 evm_27.TU.AmTr_v1... Probable disease resistance RPP8-like protein 2... 0.02 Archaeplastida
AMTR_s00061p00207600 evm_27.TU.AmTr_v1... Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00086p00099100 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G58400 No alias Disease resistance protein (CC-NBS-LRR class) family 0.07 Archaeplastida
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 Archaeplastida
AT1G59780 No alias NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
AT5G43470 HRT, RCY1, RPP8 Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT5G48620 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
ChrUn.fgenesh.mRNA.29 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
GSVIVT01018564001 No alias Putative disease resistance RPP13-like protein 3... 0.03 Archaeplastida
GSVIVT01032422001 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_25801 No alias Probable disease resistance protein At5g63020... 0.03 Archaeplastida
Gb_25804 No alias Probable disease resistance protein At1g61180... 0.03 Archaeplastida
LOC_Os04g14220.2 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os08g32880.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g34160.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g09710.1 No alias no description available(sp|p0do08|pikm2_orysj : 311.0) 0.03 Archaeplastida
MA_10425825g0010 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.02 Archaeplastida
MA_10436323g0010 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
MA_6672601g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6828207g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7138672g0010 No alias No annotation 0.03 Archaeplastida
Solyc04g009240.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc04g009250.1.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g009660.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc04g026110.4.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc07g039410.3.1 No alias Putative disease resistance RPP13-like protein 3... 0.04 Archaeplastida
Zm00001e024479_P001 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e039751_P001 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 175 425
No external refs found!