AMTR_s00029p00051450 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.41

Description : Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana

Gene families : OG0006821 (Archaeplastida) Phylogenetic Tree(s): OG0006821_tree ,
OG_05_0009059 (LandPlants) Phylogenetic Tree(s): OG_05_0009059_tree ,
OG_06_0003928 (SeedPlants) Phylogenetic Tree(s): OG_06_0003928_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00029p00051450
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00268120	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At2g29760,...	0.04	Archaeplastida
AMTR_s00016p00241430	evm_27.TU.AmTr_v1...	No description available	0.04	Archaeplastida
AMTR_s00029p00110030	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At1g08070,...	0.05	Archaeplastida
AMTR_s00049p00220350	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At2g02980,...	0.05	Archaeplastida
AMTR_s00059p00175950	No alias	Pentatricopeptide repeat-containing protein At1g08070,...	0.08	Archaeplastida
AMTR_s00092p00099090	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At1g08070,...	0.06	Archaeplastida
AMTR_s01859p00006880	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At2g29760,...	0.05	Archaeplastida
Solyc02g072010.3.1	No alias	Pentatricopeptide repeat-containing protein At4g18840...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	80	124

External Links

No external refs found!