Solyc08g005520.3.1


Description : no hits & (original description: none)


Gene families : OG0008537 (Archaeplastida) Phylogenetic Tree(s): OG0008537_tree ,
OG_05_0010395 (LandPlants) Phylogenetic Tree(s): OG_05_0010395_tree ,
OG_06_0012992 (SeedPlants) Phylogenetic Tree(s): OG_06_0012992_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005520.3.1
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g43040.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
CC GO:0030896 checkpoint clamp complex IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 14 72
No external refs found!