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  5. Solyc08g005540.2.1

Solyc08g005540.2.1


Description : amino acid transporter (LAT)


Gene families : OG0000896 (Archaeplastida) Phylogenetic Tree(s): OG0000896_tree ,
OG_05_0000706 (LandPlants) Phylogenetic Tree(s): OG_05_0000706_tree ,
OG_06_0001090 (SeedPlants) Phylogenetic Tree(s): OG_06_0001090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005540.2.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00198660 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
AMTR_s00048p00199050 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.04 Archaeplastida
Cre06.g292350 No alias Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
LOC_Os02g47210.1 No alias amino acid transporter (LAT) 0.05 Archaeplastida
LOC_Os03g25920.1 No alias amino acid transporter (LAT) 0.04 Archaeplastida
Pp3c5_13780V3.1 No alias Amino acid permease family protein 0.02 Archaeplastida
Zm00001e001820_P001 No alias amino acid transporter (LAT) 0.03 Archaeplastida
Zm00001e015550_P001 No alias amino acid transporter (LAT) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004827 proline-tRNA ligase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006433 prolyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 88 470
No external refs found!