1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g005800.4.1

Solyc08g005800.4.1


Description : pectin acetylesterase


Gene families : OG0000465 (Archaeplastida) Phylogenetic Tree(s): OG0000465_tree ,
OG_05_0000277 (LandPlants) Phylogenetic Tree(s): OG_05_0000277_tree ,
OG_06_0000320 (SeedPlants) Phylogenetic Tree(s): OG_06_0000320_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005800.4.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT4G19410 No alias Pectinacetylesterase family protein 0.05 Archaeplastida
AT5G26670 No alias Pectinacetylesterase family protein 0.04 Archaeplastida
GSVIVT01017717001 No alias Cell wall.pectin.modification and degradation.pectin... 0.02 Archaeplastida
GSVIVT01028231001 No alias Cell wall.pectin.modification and degradation.pectin... 0.04 Archaeplastida
GSVIVT01036914001 No alias Cell wall.pectin.modification and degradation.pectin... 0.05 Archaeplastida
Gb_04448 No alias pectin acetylesterase 0.02 Archaeplastida
Gb_28219 No alias pectin acetylesterase 0.05 Archaeplastida
LOC_Os01g66830.1 No alias pectin acetylesterase 0.03 Archaeplastida
LOC_Os10g40290.1 No alias Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g22170.1 No alias pectin acetylesterase 0.02 Archaeplastida
Solyc08g074990.3.1 No alias pectin acetylesterase 0.03 Archaeplastida
Zm00001e017534_P003 No alias Pectin acetylesterase 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 23 372
No external refs found!